S.E Koonin : rechercher sur Z-Library

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1

Origin and Evolution of the Universal Genetic Code

Koonin, Eugene V., Novozhilov, Artem S.

Journal:

Annual Review of Genetics

Année:

2017

Langue:

english

Fichier:

PDF, 745 KB

english, 2017

2

Classification and Nomenclature of CRISPR-Cas Systems: Where from Here?

Makarova, Kira S., Wolf, Yuri I., Koonin, Eugene V.

Journal:

The CRISPR Journal

Année:

2018

Langue:

english

Fichier:

PDF, 4.36 MB

english, 2018

3

Diversity, classification and evolution of CRISPR-Cas systems

Koonin, Eugene V, Makarova, Kira S, Zhang, Feng

Journal:

Current Opinion in Microbiology

Année:

2017

Langue:

english

Fichier:

PDF, 1.96 MB

english, 2017

4

Small CRISPR RNAs Guide Antiviral Defense in Prokaryotes

Brouns, S. J. J., Jore, M. M., Lundgren, M., Westra, E. R., Slijkhuis, R. J. H., Snijders, A. P. L., Dickman, M. J., Makarova, K. S., Koonin, E. V., van der Oost, J.

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 521 KB

english, 2008

5

Using Big Data to Understand the Human Condition: The Kavli HUMAN Project

Azmak, Okan, Bayer, Hannah, Caplin, Andrew, Chun, Miyoung, Glimcher, Paul, Koonin, Steven, Patrinos, Aristides

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 493 KB

english, 2015

6

Lamarckian or not, CRISPR-Cas is an elaborate engine of directed evolution

Koonin, Eugene V.

Journal:

Biology & Philosophy

Année:

2019

Langue:

english

Fichier:

PDF, 601 KB

english, 2019

7

Origin and evolution of the genetic code: The universal enigma

Eugene V. Koonin, Artem S. Novozhilov

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 304 KB

english, 2009

8

Classification and quantification of bacteriophage taxa in human gut metagenomes

Waller, Alison S, Yamada, Takuji, Kristensen, David M, Kultima, Jens Roat, Sunagawa, Shinichi, Koonin, Eugene V, Bork, Peer

Journal:

The ISME Journal

Année:

2014

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2014

9

The enigmatic archaeal virosphere

Prangishvili, David, Bamford, Dennis H., Forterre, Patrick, Iranzo, Jaime, Koonin, Eugene V., Krupovic, Mart

Journal:

Nature Reviews Microbiology

Année:

2017

Langue:

english

Fichier:

PDF, 7.66 MB

english, 2017

10

An Introduction to Computer Simulation Methods: Applications to Physical Systems, 2nd Edition

Gould, Harvey, Tobochnik, Jan, Meredith, Dawn C., Koonin, Steven E., McKay, Susan R., Christian, Wolfgang

Journal:

Computers in Physics

Année:

1996

Langue:

english

Fichier:

PDF, 1.25 MB

english, 1996

11

Governance of the Covid-19 response: a call for more inclusive and transparent decision-making

Rajan, Dheepa, Koch, Kira, Rohrer, Katja, Bajnoczki, Csongor, Socha, Anna, Voss, Maike, Nicod, Marjolaine, Ridde, Valery, Koonin, Justin

Journal:

BMJ Global Health

Année:

2020

Fichier:

PDF, 501 KB

2020

12

The virophage as a unique parasite of the giant mimivirus

La Scola, Bernard, Desnues, Christelle, Pagnier, Isabelle, Robert, Catherine, Barrassi, Lina, Fournous, Ghislain, Merchat, Michèle, Suzan-Monti, Marie, Forterre, Patrick, Koonin, Eugene

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 663 KB

english, 2008

13

On the origin of genomes and cells within inorganic compartments

Eugene V. Koonin, William Martin

Journal:

Trends in Genetics

Année:

2005

Langue:

english

Fichier:

PDF, 534 KB

english, 2005

14

Dark matter in archaeal genomes: a rich source of novel mobile elements, defense systems and secretory complexes

Makarova, Kira S., Wolf, Yuri I., Forterre, Patrick, Prangishvili, David, Krupovic, Mart, Koonin, Eugene V.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.28 MB

english, 2014

15

Viruses of archaea: Structural, functional, environmental and evolutionary genomics

Krupovic, Mart, Cvirkaite-Krupovic, Virginija, Iranzo, Jaime, Prangishvili, David, Koonin, Eugene V.

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 2.61 MB

english, 2018

16

Physical foundations of biological complexity

Wolf, Yuri I., Katsnelson, Mikhail I., Koonin, Eugene V.

Journal:

Proceedings of the National Academy of Sciences

Année:

2018

Langue:

english

Fichier:

PDF, 843 KB

english, 2018

17

Classify viruses — the gain is worth the pain

Kuhn, Jens H., Wolf, Yuri I., Krupovic, Mart, Zhang, Yong-Zhen, Maes, Piet, Dolja, Valerian V., Koonin, Eugene V.

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 2.28 MB

english, 2019

18

Predator Dormancy is a Stable Adaptive Strategy due to Parrondo's Paradox

Tan, Zhi‐Xuan, Koh, Jin Ming, Koonin, Eugene V., Cheong, Kang Hao

Journal:

Advanced Science

Année:

2019

Langue:

english

Fichier:

PDF, 1.86 MB

english, 2019

19

A “hybrid” R-matrix-optical model parametrization of the 12C(α, γ)16O cross section

S.E. Koonin, T.A. Tombrello, G. Fox

Journal:

Nuclear Physics A

Année:

1974

Langue:

english

Fichier:

PDF, 515 KB

english, 1974

20

Shell model Monte Carlo methods

S.E. Koonin, D.J. Dean, K. Langanke

Journal:

Physics Reports

Année:

1997

Langue:

english

Fichier:

PDF, 5.42 MB

english, 1997

21

Monte Carlo simulation of quantum computation

N.J. Cerf, S.E. Koonin

Journal:

Mathematics and Computers in Simulation

Année:

1998

Langue:

english

Fichier:

PDF, 112 KB

english, 1998

22

How stands the Tree of Life a century and a half afterThe Origin?

Maureen A O’Malley, Eugene V Koonin

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 520 KB

english, 2011

23

Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems

Kira S Makarova, L Aravind, Yuri I Wolf, Eugene V Koonin

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 2.97 MB

english, 2011

24

Shape transition in the neutron rich sodium isotopes

X. Campi, H. Flocard, A.K. Kerman, S. Koonin

Journal:

Nuclear Physics A

Année:

1975

Langue:

english

Fichier:

PDF, 519 KB

english, 1975

25

The common ancestry of life

Eugene V Koonin, Yuri I Wolf

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 397 KB

english, 2010

26

ORTHOLOGS, PARALOGS, AND EVOLUTIONARY GENOMICS1

Koonin, Eugene V.

Journal:

Annual Review of Genetics

Année:

2005

Langue:

english

Fichier:

PDF, 758 KB

english, 2005

27

The Origin at 150: is a new evolutionary synthesis in sight?

Eugene V. Koonin

Journal:

Trends in Genetics

Année:

2009

Langue:

english

Fichier:

PDF, 123 KB

english, 2009

28

Classification and evolution of P-loop GTPases and related ATPases

Detlef D Leipe, Yuri I Wolf, Eugene V Koonin, L Aravind

Journal:

Journal of Molecular Biology

Année:

2002

Langue:

english

Fichier:

PDF, 1.61 MB

english, 2002

29

Can Earth's albedo and surface temperatures increase together?

Pallé, Enric, Goode, Philip R., Montañés-Rodriguez, Pilar, Koonin, Steven E.

Journal:

Eos Transactions American Geophysical Union

Année:

2006

Langue:

english

Fichier:

PDF, 3.46 MB

english, 2006

30

Microbial culturomics: paradigm shift in the human gut microbiome study

Lagier, J.-C., Armougom, F., Million, M., Hugon, P., Pagnier, I., Robert, C., Bittar, F., Fournous, G., Gimenez, G., Maraninchi, M., Trape, J.-F., Koonin, E.V., La Scola, B., Raoult, D.

Journal:

Clinical Microbiology and Infection

Année:

2012

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2012

31

The cosmological model of eternal inflation and the transition from chance to biological evolution in the history of life

Eugene V Koonin

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 374 KB

english, 2007

32

Virophages, polintons, and transpovirons: a complex evolutionary network of diverse selfish genetic elements with different reproduction strategies

Natalya Yutin, Didier Raoult, Eugene V Koonin

Journal:

Virology Journal

Année:

2013

Langue:

english

Fichier:

PDF, 1.09 MB

english, 2013

33

BIOMEDICINE: An Independent Perspective on the Human Genome Project

Journal:

Année:

1998

Langue:

english

Fichier:

PDF, 233 KB

english, 1998

34

Pseudo-chaotic oscillations in CRISPR-virus coevolution predicted by bifurcation analysis

Faina S Berezovskaya,Yuri I Wolf,Eugene V Koonin,Georgy P Karev

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.75 MB

english, 2014

35

Evolution of the CRISPR-Cas adaptive immunity systems in prokaryotes: models and observations on virus–host coevolution

Koonin, Eugene V., Wolf, Yuri I.

Journal:

Molecular BioSystems

Année:

2015

Langue:

english

Fichier:

PDF, 1.91 MB

english, 2015

36

Phylogeny of Cas9 determines functional exchangeability of dual-RNA and Cas9 among orthologous type II CRISPR-Cas systems

Fonfara, I., Le Rhun, A., Chylinski, K., Makarova, K. S., Lecrivain, A.-L., Bzdrenga, J., Koonin, E. V., Charpentier, E.

Journal:

Nucleic Acids Research

Année:

2014

Langue:

english

Fichier:

PDF, 10.93 MB

english, 2014

37

Genome reduction as the dominant mode of evolution

Wolf, Yuri I., Koonin, Eugene V.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 190 KB

english, 2013

38

Carl Woese's vision of cellular evolution and the domains of life

Koonin, Eugene V

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 946 KB

english, 2014

39

A new family of hybrid virophages from an animal gut metagenome

Yutin, Natalya, Kapitonov, Vladimir V, Koonin, Eugene V

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 510 KB

english, 2015

40

Evolutionary Dynamics of the Prokaryotic Adaptive Immunity System CRISPR-Cas in an Explicit Ecological Context

Iranzo, J., Lobkovsky, A. E., Wolf, Y. I., Koonin, E. V.

Journal:

Journal of Bacteriology

Année:

2013

Langue:

english

Fichier:

PDF, 10.69 MB

english, 2013

41

Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systems

Mohanraju, P., Makarova, K. S., Zetsche, B., Zhang, F., Koonin, E. V., van der Oost, J.

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 2.33 MB

english, 2016

42

Polintons, virophages and transpovirons: a tangled web linking viruses, transposons and immunity

Koonin, Eugene V, Krupovic, Mart

Journal:

Current Opinion in Virology

Année:

2017

Langue:

english

Fichier:

PDF, 499 KB

english, 2017

43

Towards physical principles of biological evolution

Katsnelson, Mikhail I, Wolf, Yuri I, Koonin, Eugene V

Journal:

Physica Scripta

Année:

2018

Langue:

english

Fichier:

PDF, 1.11 MB

english, 2018

44

Frozen Accident Pushing 50: Stereochemistry, Expansion, and Chance in the Evolution of the Genetic Code

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 1005 KB

english, 2017

45

Microbial genomics challenge Darwin

Raoult, Didier, Koonin, Eugene V.

Journal:

Frontiers in Cellular and Infection Microbiology

Année:

2012

Langue:

english

Fichier:

PDF, 405 KB

english, 2012

46

The depths of virus exaptation

Koonin, Eugene V, Krupovic, Mart

Journal:

Current Opinion in Virology

Année:

2018

Langue:

english

Fichier:

PDF, 458 KB

english, 2018

47

[Advances in Virus Research] || Evolution of the Large Nucleocytoplasmic DNA Viruses of Eukaryotes and Convergent Origins of Viral Gigantism

Koonin, Eugene V.

Année:

2018

Langue:

english

Fichier:

PDF, 948 KB

english, 2018

48

Deep Roots and Splendid Boughs of the Global Plant Virome

Dolja, Valerian V., Krupovic, Mart, Koonin, Eugene V.

Journal:

Annual Review of Phytopathology

Année:

2020

Fichier:

PDF, 4.71 MB

2020

49

The LUCA and its complex virome

Krupovic, Mart, Dolja, Valerian V., Koonin, Eugene V.

Journal:

Nature Reviews Microbiology

Année:

2020

Fichier:

PDF, 1.65 MB

2020

50

CDC's Flu on Call Simulation: Testing a National Helpline for Use During an Influenza Pandemic

Koonin, Lisa M., Sliger, Kellye, Kerr, Justin, Bullen-Austin, Lisa, Graeden, Ellie, Farris, Kevin, Ionta, Christopher, Krause, Diane, Patel, Anita

Journal:

Health Security

Année:

2020

Fichier:

PDF, 374 KB

2020